Commits · master · evolgen / introgression

Nov 03, 2017
- added distIUPAC link · 04437f90
  Kristian Ullrich authored 7 years ago
  
  04437f90
- added twisst and GEM analysis · 0de79b16
  Kristian Ullrich authored 7 years ago
  
  0de79b16
- added ANGSD citation · 0d17cfda
  Kristian Ullrich authored 7 years ago
  
  0d17cfda
- changed to recent ANGSD version with direct creation of FASTA files from... · f1e542a4
  Kristian Ullrich authored 7 years ago
  
  changed to recent ANGSD version with direct creation of FASTA files from mapped BAM files without intermediate steps for masking file generation and VCF file
  f1e542a4
Aug 03, 2017
- added phangorn library due to midpoint calculation · aab5a5d5
  Kristian Ullrich authored 7 years ago
  
  aab5a5d5
- corrected url to sliding_window_generator.r · 18063bc1
  Kristian Ullrich authored 7 years ago
  
  18063bc1
- corrected URL to sliding_window_generator.r · 36092241
  Kristian Ullrich authored 7 years ago
  
  36092241
Jul 26, 2017
- added simulation part · 20e98084
  Kristian Ullrich authored 7 years ago
  
  20e98084
- added 'get_dK80.r' description · 9df63214
  Kristian Ullrich authored 7 years ago
  
  9df63214
Jul 25, 2017
- changed url to 'sliding_window_steps_generator.r' · 47b16e01
  Kristian Ullrich authored 7 years ago
  
  47b16e01
- changed general setup · f543a201
  Kristian Ullrich authored 7 years ago
  
  f543a201
Jun 22, 2017
- Update README.md · d3e7253d
  Kristian Ullrich authored 7 years ago
  
  d3e7253d
Mar 09, 2017
- added comment on individual masking · a4e1f6fe
  Kristian Ullrich authored 8 years ago
  
  a4e1f6fe
Mar 07, 2017
- added individual masking · c5744409
  Kristian Ullrich authored 8 years ago
  
  c5744409
- added SNP and INDEL calling · f6f16f61
  Kristian Ullrich authored 8 years ago
  
  f6f16f61
Feb 27, 2017
- added simdiv.py · f26825fe
  Kristian Ullrich authored 8 years ago
  
  f26825fe
Feb 23, 2017
- bug fix if sample names equals to 'CHROM,POS,ID,REF,ALT,QUAL,FILTER,INFO,FORMAT' · 5b3dd851
  Kristian Ullrich authored 8 years ago
  
  5b3dd851
Feb 22, 2017
- added masking method · 36b5b421
  Kristian Ullrich authored 8 years ago
  
  36b5b421
- changed data sources · 07f5ccd2
  Kristian Ullrich authored 8 years ago
  
  07f5ccd2
- added data sources · 79ae7e13
  Kristian Ullrich authored 8 years ago
  
  79ae7e13
Feb 10, 2017
- script for vcf parsing now combined in one python script · 0cf638d7
  Kristian Ullrich authored 8 years ago
  
  0cf638d7
Feb 09, 2017
- update README.md · 48a7b14b
  Kristian Ullrich authored 8 years ago
  
  48a7b14b
- add mvcf2consensus.py · 6c7c63d9
  Kristian Ullrich authored 8 years ago
  
  6c7c63d9
- add README · e62b5dd9
  Kristian Ullrich authored 8 years ago
  
  e62b5dd9