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Created with Raphaël 2.2.03Nov3Aug26Jul2522Jun9Mar727Feb2322109added distIUPAC linkmastermasteradded twisst and GEM analysisadded ANGSD citationchanged to recent ANGSD version with direct creation of FASTA files from mapped BAM files without intermediate steps for masking file generation and VCF fileadded phangorn library due to midpoint calculationcorrected url to sliding_window_generator.rcorrected URL to sliding_window_generator.radded simulation partadded 'get_dK80.r' descriptionchanged url to 'sliding_window_steps_generator.r'changed general setupUpdate README.mdadded comment on individual maskingadded individual maskingadded SNP and INDEL callingadded simdiv.pybug fix if sample names equals to 'CHROM,POS,ID,REF,ALT,QUAL,FILTER,INFO,FORMAT'added masking methodchanged data sourcesadded data sourcesscript for vcf parsing now combined in one python scriptupdate README.mdadd mvcf2consensus.pyadd README