This function converts an ape
DNAbin
into a
DNAStringSet
.
dnabin2dnastring(dnabin)
ape
DNAbin
[mandatory]
An object of class DNAStringSet
data(woodmouse, package="ape")
## convert into DNAStringSet
#dnabin2dnastring(woodmouse)
woodmouse |> dnabin2dnastring()
#> DNAStringSet object of length 15:
#> width seq names
#> [1] 965 NTTCGAAAAACACACCCACTACT...GCCCAATTACTCAGACCCTATA No305
#> [2] 965 ATTCGAAAAACACACCCACTACT...GCCCAATTACTCAAACCCTGTN No304
#> [3] 965 ATTCGAAAAACACACCCACTACT...GCCCAATTACTCAAACCCTATA No306
#> [4] 965 ATTCGAAAAACACACCCACTACT...GCCCAATTACTCAAATACNNNN No0906S
#> [5] 965 ATTCGAAAAACACACCCACTACT...GCCCAATTACTCAAACCCNNNN No0908S
#> ... ... ...
#> [11] 965 ATTCGAAAAACACACCCACTACT...GCCCAATTACTCAAACCCNNNN No1007S
#> [12] 965 NNNNNNNNNNNNNNNNNNNNNNN...GCCCAATTACTCAAACCCNNNN No1114S
#> [13] 965 ATTCGAAAAACACACCCACTACT...GCCCAATTACTCAAACCCNNNN No1202S
#> [14] 965 ATTCGAAAAACACACCCACTACT...GCCCAATTACTCAAACCCNNNN No1206S
#> [15] 965 NNNCGAAAAACACACCCACTACT...GCCCAATTACTCAAACCCNNNN No1208S